Reman compressor could be bad. Any chance clutch is making the noise and not the compressor itself in your opinion? The yellow/green would be dye and was used in some GMs from new. Not so sure about this descrition of "Styrofoam" as the O tube is a very fine mesh screen but could have just be oiled up. What you don't want is metal, pepper like particles or black colors = "black death" which requires a total system flush out and I don't know if this condenser will flush out as some don't.
I think this is a "variable" rate compressor and pressures are elusive diag info on those and they will stay engaged at very low, low pressure side and I think it also senses temp thru perhaps a "thermistor" ..
Oil: Seems like you are within a couple ounces of when this system was operating properly before anything was touched - correct? That's good. I was worried about the chance this was choking on oil.
Notes: Compressors make noise when oil isn't getting to them, low charges sometimes, refrigerant overcharges (not the problem as I see it for this), plain worn/defective and could with choking on oil which isn't an exact science but thought that most will toss extra oil to accumulate in condenser and reduce performance and give strange operating pressures.
When adding refrigerant, just how are you doing that? 12oz cans or something else? If something else please say what's in it and the listed weight of contents.
I'm confused about this noise as you are. Worried that this one could have made a debris field that original apparently didn't - dammit! You observed 60F vent temps while you are pretty sure you still weren't fully charged which could be just momentary while adding refrigerant. When adding refrigerant it's best to get what you can into the vacuum first which can be perhaps 1/3 of the charge depending on how done. From there you add in spurts and watch pressures even with knowing amounts added along the way. It takes a short while for system to stabilize. There's a direct pressure/temp ratio with output temps and low side pressure observations. To see 60F at a vent suggests low pressure was at mid/low 40s at the moment that occured.
Gotta ask as this may be a different set up - Does this use a low pressure, two wire cut out switch which normally would be on or near the accumulator on return side? Need to know that but it still doesn't explain the noise - for the moment I just don't know why that's happening,
T